Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brf2Q3UAW9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.42□□□□□ -0.26
Brf2Q3UAW9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Gm25911-201ENSMUST00000157621 56 ntBASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Brf2Q3UAW9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Brf2Q3UAW9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms