Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.74□□□□□ -0.53
Trim63Q38HM4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.74□□□□□ -0.53
Trim63Q38HM4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.73□□□□□ -0.53
Trim63Q38HM4 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.73□□□□□ -0.53
Trim63Q38HM4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Celf4-206ENSMUST00000224553 1729 ntBASIC11.73□□□□□ -0.53
Trim63Q38HM4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim63Q38HM4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim63Q38HM4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.72□□□□□ -0.53
Trim63Q38HM4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.72□□□□□ -0.53
Trim63Q38HM4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim63Q38HM4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim63Q38HM4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms