Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm5621-201ENSMUST00000187303 640 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm19221-201ENSMUST00000221827 1477 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm13996-201ENSMUST00000118456 430 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm12882-201ENSMUST00000121696 517 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm15544-201ENSMUST00000118776 1531 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm22138-201ENSMUST00000158748 128 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm45550-201ENSMUST00000209380 946 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 AC164087.2-201ENSMUST00000216206 1072 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 AC166574.4-201ENSMUST00000227165 1937 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm5597-201ENSMUST00000182353 1193 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm43338-201ENSMUST00000198617 2223 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm18244-201ENSMUST00000219747 1566 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm15432-201ENSMUST00000121106 195 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 AC107638.1-201ENSMUST00000213690 1061 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm5909-201ENSMUST00000119768 1281 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm7292-201ENSMUST00000194706 2527 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Gm13730-201ENSMUST00000121036 1462 ntBASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ush2AQ2QI47 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Gm25072-201ENSMUST00000175233 235 ntBASIC7.35□□□□□ -1.23
Ush2AQ2QI47 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Gm9358-201ENSMUST00000183067 927 ntBASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Gm3793-201ENSMUST00000204973 672 ntBASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Gm9463-201ENSMUST00000206707 601 ntBASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Ush2AQ2QI47 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms