Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Col19a1Q0VF58 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm25261-201ENSMUST00000157416 134 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm42550-201ENSMUST00000201553 960 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Col19a1Q0VF58 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.04■□□□□ -0
Col19a1Q0VF58 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col19a1Q0VF58 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col19a1Q0VF58 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.03■□□□□ -0
Col19a1Q0VF58 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Gm25927-201ENSMUST00000175058 117 ntBASIC15.03■□□□□ -0
Col19a1Q0VF58 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Mir6979-201ENSMUST00000183927 56 ntBASIC15.03■□□□□ -0
Col19a1Q0VF58 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.03■□□□□ -0
Col19a1Q0VF58 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col19a1Q0VF58 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col19a1Q0VF58 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Col19a1Q0VF58 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col19a1Q0VF58 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Col19a1Q0VF58 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.02■□□□□ -0
Col19a1Q0VF58 Gm13786-201ENSMUST00000122371 333 ntBASIC15.02■□□□□ -0
Col19a1Q0VF58 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.02■□□□□ -0
Col19a1Q0VF58 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.02■□□□□ -0
Col19a1Q0VF58 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.02■□□□□ -0
Col19a1Q0VF58 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.02■□□□□ -0
Col19a1Q0VF58 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col19a1Q0VF58 Mir497b-201ENSMUST00000093601 125 ntBASIC15.02■□□□□ -0
Col19a1Q0VF58 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col19a1Q0VF58 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.01□□□□□ -0.01
Col19a1Q0VF58 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col19a1Q0VF58 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col19a1Q0VF58 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col19a1Q0VF58 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms