Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.62□□□□□ -0.39
Chd8Q09XV5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Gm13600-201ENSMUST00000117949 744 ntBASIC12.61□□□□□ -0.39
Chd8Q09XV5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 AA914427-201ENSMUST00000193194 1166 ntBASIC12.61□□□□□ -0.39
Chd8Q09XV5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.61□□□□□ -0.39
Chd8Q09XV5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.61□□□□□ -0.39
Chd8Q09XV5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd8Q09XV5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Gm10179-201ENSMUST00000086233 688 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.6□□□□□ -0.39
Chd8Q09XV5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd8Q09XV5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Mir181d-201ENSMUST00000102383 72 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Gm6630-201ENSMUST00000119199 454 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Gm38317-201ENSMUST00000195564 343 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.59□□□□□ -0.39
Chd8Q09XV5 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.59□□□□□ -0.39
Chd8Q09XV5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms