Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdx4Q07424 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm16026-204ENSMUST00000162652 683 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm24158-201ENSMUST00000175263 71 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm7774-201ENSMUST00000200064 533 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.03□□□□□ -0.64
Cdx4Q07424 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdx4Q07424 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdx4Q07424 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx4Q07424 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdx4Q07424 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx4Q07424 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx4Q07424 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.02□□□□□ -0.64
Cdx4Q07424 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx4Q07424 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdx4Q07424 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.02□□□□□ -0.64
Cdx4Q07424 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm9385-201ENSMUST00000117563 472 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm23547-201ENSMUST00000158210 271 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Auts2-212ENSMUST00000178555 309 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm27430-201ENSMUST00000184585 107 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm43474-201ENSMUST00000196415 774 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm44333-201ENSMUST00000197168 107 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.02□□□□□ -0.65
Cdx4Q07424 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdx4Q07424 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdx4Q07424 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx4Q07424 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx4Q07424 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdx4Q07424 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms