Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.34□□□□□ -0.11
Pfdn6Q03958 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn6Q03958 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn6Q03958 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pfdn6Q03958 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn6Q03958 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.33□□□□□ -0.12
Pfdn6Q03958 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.33□□□□□ -0.12
Pfdn6Q03958 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn6Q03958 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Mir1895-201ENSMUST00000122615 79 ntBASIC14.32□□□□□ -0.12
Pfdn6Q03958 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Gm38225-201ENSMUST00000194001 393 ntBASIC14.32□□□□□ -0.12
Pfdn6Q03958 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 AW822252-206ENSMUST00000208904 237 ntBASIC14.32□□□□□ -0.12
Pfdn6Q03958 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn6Q03958 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn6Q03958 Gm10175-201ENSMUST00000086013 645 ntBASIC14.31□□□□□ -0.12
Pfdn6Q03958 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms