Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Npas1P97459 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.97□□□□□ -0.49
Npas1P97459 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.97□□□□□ -0.49
Npas1P97459 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Gm7284-201ENSMUST00000131667 944 ntBASIC11.97□□□□□ -0.49
Npas1P97459 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.97□□□□□ -0.49
Npas1P97459 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.97□□□□□ -0.49
Npas1P97459 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Npas1P97459 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.97□□□□□ -0.49
Npas1P97459 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.97□□□□□ -0.49
Npas1P97459 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Npas1P97459 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npas1P97459 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.96□□□□□ -0.49
Npas1P97459 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Npas1P97459 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Npas1P97459 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Gm15372-201ENSMUST00000120729 834 ntBASIC11.96□□□□□ -0.49
Npas1P97459 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.96□□□□□ -0.49
Npas1P97459 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.96□□□□□ -0.49
Npas1P97459 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.96□□□□□ -0.49
Npas1P97459 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Npas1P97459 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Npas1P97459 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.96□□□□□ -0.5
Npas1P97459 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Npas1P97459 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Npas1P97459 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.96□□□□□ -0.5
Npas1P97459 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.5
Npas1P97459 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Npas1P97459 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.95□□□□□ -0.5
Npas1P97459 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Npas1P97459 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms