Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.79■□□□□ 0.44
Nkx2-3P97334 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.79■□□□□ 0.44
Nkx2-3P97334 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx2-3P97334 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Gm29127-201ENSMUST00000188304 517 ntBASIC17.78■□□□□ 0.44
Nkx2-3P97334 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.78■□□□□ 0.44
Nkx2-3P97334 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.78■□□□□ 0.44
Nkx2-3P97334 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-3P97334 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Gm14660-201ENSMUST00000119809 575 ntBASIC17.77■□□□□ 0.44
Nkx2-3P97334 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Gm24420-201ENSMUST00000176676 59 ntBASIC17.77■□□□□ 0.44
Nkx2-3P97334 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx2-3P97334 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.77■□□□□ 0.44
Nkx2-3P97334 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-3P97334 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-3P97334 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-3P97334 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Gm13392-201ENSMUST00000117708 150 ntBASIC17.76■□□□□ 0.43
Nkx2-3P97334 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Gm8598-201ENSMUST00000221184 836 ntBASIC17.76■□□□□ 0.43
Nkx2-3P97334 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-3P97334 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms