Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm7809-201ENSMUST00000153199 742 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm27552-201ENSMUST00000183351 62 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Gm27844-201ENSMUST00000183613 62 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Gm8885-201ENSMUST00000189382 598 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.49□□□□□ -0.89
PrkdcP97313 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.49□□□□□ -0.89
PrkdcP97313 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
PrkdcP97313 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.48□□□□□ -0.89
PrkdcP97313 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.48□□□□□ -0.89
PrkdcP97313 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.48□□□□□ -0.89
PrkdcP97313 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.48□□□□□ -0.89
PrkdcP97313 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
PrkdcP97313 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.48□□□□□ -0.89
PrkdcP97313 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
PrkdcP97313 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Gm45244-201ENSMUST00000211328 2200 ntBASIC9.48□□□□□ -0.89
PrkdcP97313 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
PrkdcP97313 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.48□□□□□ -0.89
PrkdcP97313 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
PrkdcP97313 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
PrkdcP97313 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PrkdcP97313 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm38317-201ENSMUST00000195564 343 ntBASIC9.47□□□□□ -0.89
PrkdcP97313 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm13097-201ENSMUST00000210722 397 ntBASIC9.47□□□□□ -0.89
PrkdcP97313 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm42900-201ENSMUST00000197184 2167 ntBASIC9.47□□□□□ -0.89
PrkdcP97313 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
PrkdcP97313 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
PrkdcP97313 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.47□□□□□ -0.89
PrkdcP97313 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.47□□□□□ -0.89
PrkdcP97313 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm25517-201ENSMUST00000083865 134 ntBASIC9.47□□□□□ -0.89
PrkdcP97313 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
PrkdcP97313 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PrkdcP97313 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms