Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.89□□□□□ -0.51
Pdlim4P70271 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Gm5312-201ENSMUST00000203728 547 ntBASIC11.89□□□□□ -0.51
Pdlim4P70271 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim4P70271 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.89□□□□□ -0.51
Pdlim4P70271 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim4P70271 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.89□□□□□ -0.51
Pdlim4P70271 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Gm25287-201ENSMUST00000103846 110 ntBASIC11.88□□□□□ -0.51
Pdlim4P70271 Gm22918-201ENSMUST00000103855 110 ntBASIC11.88□□□□□ -0.51
Pdlim4P70271 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.88□□□□□ -0.51
Pdlim4P70271 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.88□□□□□ -0.51
Pdlim4P70271 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Gm8396-201ENSMUST00000057361 823 ntBASIC11.88□□□□□ -0.51
Pdlim4P70271 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim4P70271 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim4P70271 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Gm9824-201ENSMUST00000178707 561 ntBASIC11.87□□□□□ -0.51
Pdlim4P70271 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdlim4P70271 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim4P70271 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim4P70271 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim4P70271 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim4P70271 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms