Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vbp1P61759 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vbp1P61759 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.91□□□□□ -0.34
Vbp1P61759 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Vbp1P61759 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Vbp1P61759 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Vbp1P61759 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.91□□□□□ -0.34
Vbp1P61759 Gm25745-201ENSMUST00000174945 133 ntBASIC12.91□□□□□ -0.34
Vbp1P61759 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.91□□□□□ -0.34
Vbp1P61759 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vbp1P61759 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vbp1P61759 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vbp1P61759 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.9□□□□□ -0.34
Vbp1P61759 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Vbp1P61759 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vbp1P61759 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.9□□□□□ -0.34
Vbp1P61759 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.9□□□□□ -0.34
Vbp1P61759 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vbp1P61759 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vbp1P61759 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vbp1P61759 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vbp1P61759 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vbp1P61759 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vbp1P61759 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vbp1P61759 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vbp1P61759 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vbp1P61759 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vbp1P61759 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vbp1P61759 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms