Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NrlP54846 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.18■□□□□ 0.02
NrlP54846 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NrlP54846 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NrlP54846 BC001981-202ENSMUST00000191393 1545 ntBASIC15.17■□□□□ 0.02
NrlP54846 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.17■□□□□ 0.02
NrlP54846 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NrlP54846 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NrlP54846 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NrlP54846 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.17■□□□□ 0.02
NrlP54846 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.17■□□□□ 0.02
NrlP54846 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Gm6916-202ENSMUST00000205523 195 ntBASIC15.17■□□□□ 0.02
NrlP54846 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.17■□□□□ 0.02
NrlP54846 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NrlP54846 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NrlP54846 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.17■□□□□ 0.02
NrlP54846 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.17■□□□□ 0.02
NrlP54846 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NrlP54846 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NrlP54846 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Gm11918-201ENSMUST00000121660 179 ntBASIC15.16■□□□□ 0.02
NrlP54846 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NrlP54846 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Mir6392-201ENSMUST00000184924 108 ntBASIC15.16■□□□□ 0.02
NrlP54846 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NrlP54846 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
NrlP54846 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NrlP54846 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.15■□□□□ 0.02
NrlP54846 Gm15393-201ENSMUST00000120499 219 ntBASIC15.15■□□□□ 0.02
NrlP54846 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.15■□□□□ 0.02
NrlP54846 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.15■□□□□ 0.02
NrlP54846 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.15■□□□□ 0.02
NrlP54846 Gm8602-201ENSMUST00000184045 607 ntBASIC15.15■□□□□ 0.02
NrlP54846 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.15■□□□□ 0.02
NrlP54846 Gm33320-201ENSMUST00000192232 530 ntBASIC15.15■□□□□ 0.02
NrlP54846 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Gm19220-201ENSMUST00000222682 803 ntBASIC15.15■□□□□ 0.02
NrlP54846 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.15■□□□□ 0.02
NrlP54846 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NrlP54846 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NrlP54846 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms