Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nub1P54729 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Nub1P54729 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nub1P54729 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nub1P54729 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nub1P54729 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.35■□□□□ 0.05
Nub1P54729 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.35■□□□□ 0.05
Nub1P54729 Gm25948-201ENSMUST00000175334 112 ntBASIC15.35■□□□□ 0.05
Nub1P54729 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.35■□□□□ 0.05
Nub1P54729 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.35■□□□□ 0.05
Nub1P54729 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nub1P54729 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nub1P54729 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nub1P54729 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Nub1P54729 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.34■□□□□ 0.05
Nub1P54729 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Nub1P54729 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.34■□□□□ 0.05
Nub1P54729 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.34■□□□□ 0.05
Nub1P54729 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.34■□□□□ 0.05
Nub1P54729 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.34■□□□□ 0.05
Nub1P54729 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Nub1P54729 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nub1P54729 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nub1P54729 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nub1P54729 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.33■□□□□ 0.04
Nub1P54729 Gm6415-201ENSMUST00000118488 348 ntBASIC15.33■□□□□ 0.04
Nub1P54729 Gm15693-201ENSMUST00000120470 637 ntBASIC15.33■□□□□ 0.04
Nub1P54729 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nub1P54729 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.33■□□□□ 0.04
Nub1P54729 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.33■□□□□ 0.04
Nub1P54729 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.33■□□□□ 0.04
Nub1P54729 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.33■□□□□ 0.04
Nub1P54729 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nub1P54729 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nub1P54729 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nub1P54729 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.32■□□□□ 0.04
Nub1P54729 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nub1P54729 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.32■□□□□ 0.04
Nub1P54729 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nub1P54729 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms