Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Sox3P53784 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Sox3P53784 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox3P53784 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Gm27533-201ENSMUST00000183800 152 ntBASIC13.67□□□□□ -0.22
Sox3P53784 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox3P53784 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.67□□□□□ -0.22
Sox3P53784 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sox3P53784 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox3P53784 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.67□□□□□ -0.22
Sox3P53784 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Sox3P53784 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sox3P53784 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox3P53784 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox3P53784 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Sox3P53784 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox3P53784 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox3P53784 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Gm18766-201ENSMUST00000189811 808 ntBASIC13.66□□□□□ -0.22
Sox3P53784 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.66□□□□□ -0.22
Sox3P53784 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.66□□□□□ -0.22
Sox3P53784 Carlr-201ENSMUST00000181515 2574 ntBASIC13.66□□□□□ -0.22
Sox3P53784 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.66□□□□□ -0.22
Sox3P53784 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox3P53784 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sox3P53784 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox3P53784 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.65□□□□□ -0.22
Sox3P53784 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sox3P53784 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sox3P53784 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox3P53784 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sox3P53784 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox3P53784 Gm18018-201ENSMUST00000198273 408 ntBASIC13.65□□□□□ -0.22
Sox3P53784 Gm6266-201ENSMUST00000203844 806 ntBASIC13.65□□□□□ -0.22
Sox3P53784 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.65□□□□□ -0.22
Sox3P53784 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms