Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.06■□□□□ 0
Shmt1P50431 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shmt1P50431 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.06■□□□□ 0
Shmt1P50431 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.06■□□□□ 0
Shmt1P50431 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.06■□□□□ 0
Shmt1P50431 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shmt1P50431 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Shmt1P50431 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Shmt1P50431 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shmt1P50431 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Shmt1P50431 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Shmt1P50431 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shmt1P50431 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.05■□□□□ 0
Shmt1P50431 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt1P50431 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.05■□□□□ 0
Shmt1P50431 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt1P50431 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.05■□□□□ 0
Shmt1P50431 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Shmt1P50431 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shmt1P50431 Gm14719-201ENSMUST00000121891 340 ntBASIC15.05■□□□□ -0
Shmt1P50431 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.05■□□□□ -0
Shmt1P50431 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shmt1P50431 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
Shmt1P50431 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Shmt1P50431 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Shmt1P50431 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.05■□□□□ -0
Shmt1P50431 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.05■□□□□ -0
Shmt1P50431 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.05■□□□□ -0
Shmt1P50431 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shmt1P50431 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Shmt1P50431 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Shmt1P50431 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.04■□□□□ -0
Shmt1P50431 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.04■□□□□ -0
Shmt1P50431 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.04■□□□□ -0
Shmt1P50431 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Shmt1P50431 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.04■□□□□ -0
Shmt1P50431 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.04■□□□□ -0
Shmt1P50431 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Gm2423-201ENSMUST00000074863 733 ntBASIC15.04■□□□□ -0
Shmt1P50431 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Shmt1P50431 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shmt1P50431 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt1P50431 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.04■□□□□ -0
Shmt1P50431 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Shmt1P50431 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt1P50431 Gm3436-201ENSMUST00000179930 840 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms