Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Prox1P48437 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Prox1P48437 Gm15173-201ENSMUST00000122049 433 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.69□□□□□ -0.22
Prox1P48437 Rps4l-201ENSMUST00000071745 943 ntBASIC13.69□□□□□ -0.22
Prox1P48437 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Prox1P48437 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prox1P48437 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.69□□□□□ -0.22
Prox1P48437 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Gm11452-201ENSMUST00000122376 690 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prox1P48437 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Gm18246-201ENSMUST00000221023 728 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prox1P48437 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.68□□□□□ -0.22
Prox1P48437 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prox1P48437 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prox1P48437 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.67□□□□□ -0.22
Prox1P48437 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.67□□□□□ -0.22
Prox1P48437 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.67□□□□□ -0.22
Prox1P48437 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Gm7230-201ENSMUST00000173026 815 ntBASIC13.67□□□□□ -0.22
Prox1P48437 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prox1P48437 Gm6550-201ENSMUST00000187574 993 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms