Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm13123-201ENSMUST00000122173 492 ntBASIC20.29■□□□□ 0.84
Kdm5cP41230 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm5cP41230 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm5cP41230 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm5cP41230 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm5cP41230 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.28■□□□□ 0.84
Kdm5cP41230 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.28■□□□□ 0.84
Kdm5cP41230 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC20.28■□□□□ 0.84
Kdm5cP41230 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm5cP41230 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC20.28■□□□□ 0.84
Kdm5cP41230 AC154412.1-201ENSMUST00000226540 2786 ntBASIC20.27■□□□□ 0.84
Kdm5cP41230 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC20.27■□□□□ 0.84
Kdm5cP41230 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Gm6621-201ENSMUST00000193251 772 ntBASIC20.27■□□□□ 0.84
Kdm5cP41230 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Gm10268-201ENSMUST00000085340 555 ntBASIC20.27■□□□□ 0.84
Kdm5cP41230 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kdm5cP41230 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Kdm5cP41230 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kdm5cP41230 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kdm5cP41230 Gm44207-201ENSMUST00000204568 1424 ntBASIC20.27■□□□□ 0.83
Kdm5cP41230 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Kdm5cP41230 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kdm5cP41230 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.26■□□□□ 0.83
Kdm5cP41230 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC20.26■□□□□ 0.83
Kdm5cP41230 Gm7046-201ENSMUST00000221351 977 ntBASIC20.26■□□□□ 0.83
Kdm5cP41230 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Kdm5cP41230 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm5cP41230 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.26■□□□□ 0.83
Kdm5cP41230 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Kdm5cP41230 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm5cP41230 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC20.25■□□□□ 0.83
Kdm5cP41230 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm5cP41230 Gm25261-201ENSMUST00000157416 134 ntBASIC20.25■□□□□ 0.83
Kdm5cP41230 Gm2991-201ENSMUST00000173338 480 ntBASIC20.25■□□□□ 0.83
Kdm5cP41230 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC20.25■□□□□ 0.83
Kdm5cP41230 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Kdm5cP41230 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.25■□□□□ 0.83
Kdm5cP41230 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm5cP41230 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Kdm5cP41230 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm5cP41230 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms