Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.81□□□□□ -0.2
TfamP40630 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
TfamP40630 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TfamP40630 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TfamP40630 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.81□□□□□ -0.2
TfamP40630 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TfamP40630 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.81□□□□□ -0.2
TfamP40630 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.81□□□□□ -0.2
TfamP40630 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Gm27920-201ENSMUST00000183953 96 ntBASIC13.81□□□□□ -0.2
TfamP40630 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.81□□□□□ -0.2
TfamP40630 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TfamP40630 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.81□□□□□ -0.2
TfamP40630 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.81□□□□□ -0.2
TfamP40630 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TfamP40630 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TfamP40630 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.8□□□□□ -0.2
TfamP40630 Gm12260-201ENSMUST00000122447 411 ntBASIC13.8□□□□□ -0.2
TfamP40630 Mir8117-201ENSMUST00000184773 107 ntBASIC13.8□□□□□ -0.2
TfamP40630 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.8□□□□□ -0.2
TfamP40630 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.8□□□□□ -0.2
TfamP40630 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TfamP40630 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TfamP40630 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.8□□□□□ -0.2
TfamP40630 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TfamP40630 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TfamP40630 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.79□□□□□ -0.2
TfamP40630 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.79□□□□□ -0.2
TfamP40630 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
TfamP40630 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Gm15427-201ENSMUST00000117288 531 ntBASIC13.79□□□□□ -0.2
TfamP40630 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.79□□□□□ -0.2
TfamP40630 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.79□□□□□ -0.2
TfamP40630 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.79□□□□□ -0.2
TfamP40630 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TfamP40630 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TfamP40630 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms