Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.31□□□□□ -0.12
RxrbP28704 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.31□□□□□ -0.12
RxrbP28704 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
RxrbP28704 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.31□□□□□ -0.12
RxrbP28704 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.3□□□□□ -0.12
RxrbP28704 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RxrbP28704 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.3□□□□□ -0.12
RxrbP28704 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Gm28659-201ENSMUST00000188013 759 ntBASIC14.3□□□□□ -0.12
RxrbP28704 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.3□□□□□ -0.12
RxrbP28704 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RxrbP28704 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RxrbP28704 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RxrbP28704 Gm4899-201ENSMUST00000178708 719 ntBASIC14.29□□□□□ -0.12
RxrbP28704 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Gm2272-201ENSMUST00000194903 582 ntBASIC14.29□□□□□ -0.12
RxrbP28704 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.29□□□□□ -0.12
RxrbP28704 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.29□□□□□ -0.12
RxrbP28704 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.29□□□□□ -0.12
RxrbP28704 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.29□□□□□ -0.12
RxrbP28704 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RxrbP28704 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.29□□□□□ -0.12
RxrbP28704 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.29□□□□□ -0.12
RxrbP28704 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RxrbP28704 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RxrbP28704 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RxrbP28704 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.28□□□□□ -0.12
RxrbP28704 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms