Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afxP27661 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
H2afxP27661 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afxP27661 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.87□□□□□ -0.03
H2afxP27661 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.87□□□□□ -0.03
H2afxP27661 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.87□□□□□ -0.03
H2afxP27661 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afxP27661 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.87□□□□□ -0.03
H2afxP27661 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afxP27661 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.86□□□□□ -0.03
H2afxP27661 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2afxP27661 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.86□□□□□ -0.03
H2afxP27661 Gm15165-201ENSMUST00000118140 502 ntBASIC14.86□□□□□ -0.03
H2afxP27661 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2afxP27661 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 Gm37055-201ENSMUST00000191866 133 ntBASIC14.86□□□□□ -0.03
H2afxP27661 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2afxP27661 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
H2afxP27661 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H2afxP27661 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afxP27661 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.85□□□□□ -0.03
H2afxP27661 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.85□□□□□ -0.03
H2afxP27661 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H2afxP27661 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.85□□□□□ -0.03
H2afxP27661 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.85□□□□□ -0.03
H2afxP27661 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.85□□□□□ -0.03
H2afxP27661 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
H2afxP27661 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.85□□□□□ -0.03
H2afxP27661 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afxP27661 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms