Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.17□□□□□ -0.3
Cd40lgP27548 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.17□□□□□ -0.3
Cd40lgP27548 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cd40lgP27548 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.17□□□□□ -0.3
Cd40lgP27548 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cd40lgP27548 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40lgP27548 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm25287-201ENSMUST00000103846 110 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm22918-201ENSMUST00000103855 110 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm9824-201ENSMUST00000178707 561 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm9726-201ENSMUST00000180321 678 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.16□□□□□ -0.3
Cd40lgP27548 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.16□□□□□ -0.3
Cd40lgP27548 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40lgP27548 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40lgP27548 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.15□□□□□ -0.3
Cd40lgP27548 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.15□□□□□ -0.3
Cd40lgP27548 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.15□□□□□ -0.3
Cd40lgP27548 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Gm13464-201ENSMUST00000119418 935 ntBASIC13.15□□□□□ -0.3
Cd40lgP27548 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Gm45098-201ENSMUST00000207179 657 ntBASIC13.15□□□□□ -0.3
Cd40lgP27548 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40lgP27548 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cd40lgP27548 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40lgP27548 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.14□□□□□ -0.31
Cd40lgP27548 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Cd40lgP27548 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cd40lgP27548 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cd40lgP27548 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40lgP27548 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms