Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.05□□□□□ -0.32
Hmgn1P18608 Gm10154-201ENSMUST00000084445 354 ntBASIC13.05□□□□□ -0.32
Hmgn1P18608 Gm10275-201ENSMUST00000092620 635 ntBASIC13.05□□□□□ -0.32
Hmgn1P18608 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgn1P18608 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgn1P18608 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Hmgn1P18608 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Gm7153-201ENSMUST00000117092 455 ntBASIC13.04□□□□□ -0.32
Hmgn1P18608 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.04□□□□□ -0.32
Hmgn1P18608 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgn1P18608 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgn1P18608 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmgn1P18608 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Gm7862-201ENSMUST00000121461 292 ntBASIC13.03□□□□□ -0.32
Hmgn1P18608 Gm28033-201ENSMUST00000184224 96 ntBASIC13.03□□□□□ -0.32
Hmgn1P18608 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.03□□□□□ -0.32
Hmgn1P18608 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgn1P18608 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms