Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdx1P18111 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdx1P18111 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdx1P18111 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdx1P18111 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdx1P18111 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdx1P18111 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdx1P18111 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdx1P18111 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.53□□□□□ -0.56
Cdx1P18111 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cdx1P18111 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.53□□□□□ -0.56
Cdx1P18111 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdx1P18111 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdx1P18111 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdx1P18111 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdx1P18111 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Gm15590-201ENSMUST00000078419 552 ntBASIC11.53□□□□□ -0.56
Cdx1P18111 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdx1P18111 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Cdx1P18111 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cdx1P18111 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdx1P18111 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.53□□□□□ -0.56
Cdx1P18111 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdx1P18111 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.52□□□□□ -0.56
Cdx1P18111 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdx1P18111 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdx1P18111 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdx1P18111 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Cdx1P18111 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm7222-201ENSMUST00000117512 906 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Gm11780-201ENSMUST00000136880 516 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdx1P18111 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm25406-201ENSMUST00000157599 105 ntBASIC11.52□□□□□ -0.57
Cdx1P18111 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cdx1P18111 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms