Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxc9P09633 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Gm6983-201ENSMUST00000214912 628 ntBASIC18.34■□□□□ 0.53
Hoxc9P09633 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Gm6091-201ENSMUST00000098307 165 ntBASIC18.34■□□□□ 0.53
Hoxc9P09633 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxc9P09633 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc9P09633 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Hoxc9P09633 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc9P09633 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc9P09633 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc9P09633 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.33■□□□□ 0.53
Hoxc9P09633 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Hoxc9P09633 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.33■□□□□ 0.53
Hoxc9P09633 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc9P09633 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.33■□□□□ 0.53
Hoxc9P09633 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Gm12742-201ENSMUST00000117326 410 ntBASIC18.33■□□□□ 0.52
Hoxc9P09633 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.33■□□□□ 0.52
Hoxc9P09633 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.33■□□□□ 0.52
Hoxc9P09633 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.33■□□□□ 0.52
Hoxc9P09633 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.33■□□□□ 0.52
Hoxc9P09633 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.33■□□□□ 0.52
Hoxc9P09633 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.33■□□□□ 0.52
Hoxc9P09633 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.33■□□□□ 0.52
Hoxc9P09633 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxc9P09633 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hoxc9P09633 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hoxc9P09633 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm14660-201ENSMUST00000119809 575 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.32■□□□□ 0.52
Hoxc9P09633 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Mir6420-201ENSMUST00000185032 102 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm45784-201ENSMUST00000188360 142 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm10012-201ENSMUST00000078252 192 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.32■□□□□ 0.52
Hoxc9P09633 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.32■□□□□ 0.52
Hoxc9P09633 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxc9P09633 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.31■□□□□ 0.52
Hoxc9P09633 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Gm29127-201ENSMUST00000188304 517 ntBASIC18.31■□□□□ 0.52
Hoxc9P09633 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxc9P09633 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hoxc9P09633 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxc9P09633 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms