Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.53□□□□□ -0.4
P04224 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
P04224 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P04224 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.53□□□□□ -0.4
P04224 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04224 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04224 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P04224 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04224 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P04224 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
P04224 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04224 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
P04224 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.52□□□□□ -0.4
P04224 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04224 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P04224 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.52□□□□□ -0.41
P04224 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P04224 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.52□□□□□ -0.41
P04224 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.52□□□□□ -0.41
P04224 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.52□□□□□ -0.41
P04224 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Gm27357-201ENSMUST00000183754 135 ntBASIC12.52□□□□□ -0.41
P04224 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.52□□□□□ -0.41
P04224 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.52□□□□□ -0.41
P04224 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
P04224 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P04224 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.52□□□□□ -0.41
P04224 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.52□□□□□ -0.41
P04224 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.52□□□□□ -0.41
P04224 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P04224 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
P04224 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.52□□□□□ -0.41
P04224 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04224 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P04224 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P04224 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P04224 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.51□□□□□ -0.41
P04224 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P04224 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P04224 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.51□□□□□ -0.41
P04224 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.51□□□□□ -0.41
P04224 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.51□□□□□ -0.41
P04224 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.51□□□□□ -0.41
P04224 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.51□□□□□ -0.41
P04224 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.51□□□□□ -0.41
P04224 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P04224 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04224 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms