Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Gm12134-201ENSMUST00000122109 520 ntBASIC14.36□□□□□ -0.11
Sp1O89090 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.36□□□□□ -0.11
Sp1O89090 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.36□□□□□ -0.11
Sp1O89090 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.36□□□□□ -0.11
Sp1O89090 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sp1O89090 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sp1O89090 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sp1O89090 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp1O89090 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sp1O89090 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.36□□□□□ -0.11
Sp1O89090 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sp1O89090 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sp1O89090 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sp1O89090 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.35□□□□□ -0.11
Sp1O89090 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.35□□□□□ -0.11
Sp1O89090 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.35□□□□□ -0.11
Sp1O89090 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.35□□□□□ -0.11
Sp1O89090 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Sp1O89090 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sp1O89090 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.35□□□□□ -0.11
Sp1O89090 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sp1O89090 Gm4804-201ENSMUST00000182234 999 ntBASIC14.35□□□□□ -0.11
Sp1O89090 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.35□□□□□ -0.11
Sp1O89090 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.35□□□□□ -0.11
Sp1O89090 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.35□□□□□ -0.11
Sp1O89090 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.35□□□□□ -0.11
Sp1O89090 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp1O89090 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.34□□□□□ -0.11
Sp1O89090 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.34□□□□□ -0.11
Sp1O89090 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.34□□□□□ -0.11
Sp1O89090 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sp1O89090 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sp1O89090 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.34□□□□□ -0.11
Sp1O89090 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.34□□□□□ -0.11
Sp1O89090 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sp1O89090 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp1O89090 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sp1O89090 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.33□□□□□ -0.12
Sp1O89090 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp1O89090 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp1O89090 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp1O89090 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Sp1O89090 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms