Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.61□□□□□ -0.23
Vti1bO88384 Gm27301-201ENSMUST00000184012 127 ntBASIC13.61□□□□□ -0.23
Vti1bO88384 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.61□□□□□ -0.23
Vti1bO88384 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.61□□□□□ -0.23
Vti1bO88384 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.61□□□□□ -0.23
Vti1bO88384 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vti1bO88384 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vti1bO88384 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.61□□□□□ -0.23
Vti1bO88384 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Vti1bO88384 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1bO88384 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.6□□□□□ -0.23
Vti1bO88384 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vti1bO88384 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.6□□□□□ -0.23
Vti1bO88384 Gm44492-201ENSMUST00000197012 141 ntBASIC13.6□□□□□ -0.23
Vti1bO88384 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.6□□□□□ -0.23
Vti1bO88384 Gm10154-201ENSMUST00000084445 354 ntBASIC13.6□□□□□ -0.23
Vti1bO88384 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vti1bO88384 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vti1bO88384 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vti1bO88384 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Vti1bO88384 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vti1bO88384 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
Vti1bO88384 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.59□□□□□ -0.23
Vti1bO88384 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.59□□□□□ -0.23
Vti1bO88384 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.59□□□□□ -0.23
Vti1bO88384 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.59□□□□□ -0.23
Vti1bO88384 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vti1bO88384 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vti1bO88384 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.59□□□□□ -0.23
Vti1bO88384 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.59□□□□□ -0.23
Vti1bO88384 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vti1bO88384 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Vti1bO88384 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vti1bO88384 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms