Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm29741-201ENSMUST00000192667 421 ntBASIC12.67□□□□□ -0.38
Col5a1O88207 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.67□□□□□ -0.38
Col5a1O88207 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Col5a1O88207 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm12928-201ENSMUST00000117115 573 ntBASIC12.67□□□□□ -0.38
Col5a1O88207 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.67□□□□□ -0.38
Col5a1O88207 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col5a1O88207 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col5a1O88207 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm13689-201ENSMUST00000119360 685 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.66□□□□□ -0.38
Col5a1O88207 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.66□□□□□ -0.38
Col5a1O88207 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm38266-201ENSMUST00000194931 421 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm8598-201ENSMUST00000221184 836 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.66□□□□□ -0.38
Col5a1O88207 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Col5a1O88207 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.66□□□□□ -0.38
Col5a1O88207 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col5a1O88207 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col5a1O88207 Gm15770-201ENSMUST00000117498 584 ntBASIC12.65□□□□□ -0.38
Col5a1O88207 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col5a1O88207 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.65□□□□□ -0.38
Col5a1O88207 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.65□□□□□ -0.38
Col5a1O88207 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.65□□□□□ -0.38
Col5a1O88207 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col5a1O88207 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col5a1O88207 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col5a1O88207 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms