Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.93□□□□□ -0.5
Pfdn2O70591 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pfdn2O70591 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.92□□□□□ -0.5
Pfdn2O70591 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.92□□□□□ -0.5
Pfdn2O70591 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.92□□□□□ -0.5
Pfdn2O70591 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm12008-201ENSMUST00000117791 755 ntBASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.92□□□□□ -0.5
Pfdn2O70591 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.92□□□□□ -0.5
Pfdn2O70591 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn2O70591 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.91□□□□□ -0.5
Pfdn2O70591 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Gm12644-201ENSMUST00000119935 606 ntBASIC11.91□□□□□ -0.5
Pfdn2O70591 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.91□□□□□ -0.5
Pfdn2O70591 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.91□□□□□ -0.5
Pfdn2O70591 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn2O70591 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn2O70591 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.9□□□□□ -0.5
Pfdn2O70591 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn2O70591 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms