Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ldb2O55203 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ldb2O55203 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ldb2O55203 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ldb2O55203 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.17□□□□□ -0.14
Ldb2O55203 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ldb2O55203 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.17□□□□□ -0.14
Ldb2O55203 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.17□□□□□ -0.14
Ldb2O55203 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ldb2O55203 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ldb2O55203 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.17□□□□□ -0.14
Ldb2O55203 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
Ldb2O55203 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.16□□□□□ -0.14
Ldb2O55203 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Gm6415-201ENSMUST00000118488 348 ntBASIC14.16□□□□□ -0.14
Ldb2O55203 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ldb2O55203 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ldb2O55203 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Ldb2O55203 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ldb2O55203 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ldb2O55203 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.15□□□□□ -0.14
Ldb2O55203 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.15□□□□□ -0.14
Ldb2O55203 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Gm8584-201ENSMUST00000171982 758 ntBASIC14.15□□□□□ -0.14
Ldb2O55203 Gm28630-201ENSMUST00000187806 498 ntBASIC14.15□□□□□ -0.14
Ldb2O55203 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ldb2O55203 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ldb2O55203 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Gm44608-201ENSMUST00000206827 855 ntBASIC14.15□□□□□ -0.14
Ldb2O55203 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.15□□□□□ -0.14
Ldb2O55203 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.15□□□□□ -0.14
Ldb2O55203 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb2O55203 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms