Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smarce1O54941 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.94■□□□□ 0.3
Smarce1O54941 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Smarce1O54941 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarce1O54941 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.94■□□□□ 0.3
Smarce1O54941 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Smarce1O54941 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarce1O54941 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Smarce1O54941 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.93■□□□□ 0.3
Smarce1O54941 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.93■□□□□ 0.3
Smarce1O54941 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.93■□□□□ 0.3
Smarce1O54941 Gm27920-201ENSMUST00000183953 96 ntBASIC16.93■□□□□ 0.3
Smarce1O54941 Gm7461-201ENSMUST00000058918 827 ntBASIC16.93■□□□□ 0.3
Smarce1O54941 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smarce1O54941 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smarce1O54941 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarce1O54941 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Smarce1O54941 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smarce1O54941 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.92■□□□□ 0.3
Smarce1O54941 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarce1O54941 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Smarce1O54941 Gm18733-201ENSMUST00000173950 856 ntBASIC16.92■□□□□ 0.3
Smarce1O54941 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.92■□□□□ 0.3
Smarce1O54941 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.92■□□□□ 0.3
Smarce1O54941 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarce1O54941 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarce1O54941 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.91■□□□□ 0.3
Smarce1O54941 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smarce1O54941 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smarce1O54941 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.91■□□□□ 0.3
Smarce1O54941 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.91■□□□□ 0.3
Smarce1O54941 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.91■□□□□ 0.3
Smarce1O54941 Gm17968-201ENSMUST00000194902 784 ntBASIC16.91■□□□□ 0.3
Smarce1O54941 Psmb5-202ENSMUST00000227257 622 ntBASIC16.91■□□□□ 0.3
Smarce1O54941 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.91■□□□□ 0.3
Smarce1O54941 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarce1O54941 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smarce1O54941 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Smarce1O54941 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Smarce1O54941 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarce1O54941 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms