Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.65□□□□□ -0.06
Trove2O08848 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trove2O08848 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trove2O08848 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trove2O08848 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.64□□□□□ -0.07
Trove2O08848 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.64□□□□□ -0.07
Trove2O08848 Gm27741-201ENSMUST00000185060 237 ntBASIC14.64□□□□□ -0.07
Trove2O08848 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.64□□□□□ -0.07
Trove2O08848 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.64□□□□□ -0.07
Trove2O08848 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.64□□□□□ -0.07
Trove2O08848 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.64□□□□□ -0.07
Trove2O08848 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.64□□□□□ -0.07
Trove2O08848 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.64□□□□□ -0.07
Trove2O08848 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trove2O08848 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trove2O08848 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Gm13036-201ENSMUST00000117799 748 ntBASIC14.63□□□□□ -0.07
Trove2O08848 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.63□□□□□ -0.07
Trove2O08848 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trove2O08848 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.63□□□□□ -0.07
Trove2O08848 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.63□□□□□ -0.07
Trove2O08848 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Gm15590-201ENSMUST00000078419 552 ntBASIC14.63□□□□□ -0.07
Trove2O08848 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.63□□□□□ -0.07
Trove2O08848 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.63□□□□□ -0.07
Trove2O08848 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.63□□□□□ -0.07
Trove2O08848 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trove2O08848 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.62□□□□□ -0.07
Trove2O08848 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Mir5126-201ENSMUST00000175513 77 ntBASIC14.62□□□□□ -0.07
Trove2O08848 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.62□□□□□ -0.07
Trove2O08848 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.62□□□□□ -0.07
Trove2O08848 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.62□□□□□ -0.07
Trove2O08848 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trove2O08848 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.62□□□□□ -0.07
Trove2O08848 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms