Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Gm6222-201ENSMUST00000120787 396 ntBASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Gm27631-201ENSMUST00000184163 466 ntBASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chrna9G3X8Z7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Gm6443-201ENSMUST00000203599 874 ntBASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna9G3X8Z7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gm25287-201ENSMUST00000103846 110 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gm22918-201ENSMUST00000103855 110 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Mir1895-201ENSMUST00000122615 79 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Mir6990-201ENSMUST00000183724 91 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna9G3X8Z7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna9G3X8Z7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.26■□□□□ 0.03
Chrna9G3X8Z7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms