Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Mir698-201ENSMUST00000102164 109 ntBASIC13.37□□□□□ -0.27
Colca2F8VPY8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.37□□□□□ -0.27
Colca2F8VPY8 Gm13342-201ENSMUST00000121055 207 ntBASIC13.37□□□□□ -0.27
Colca2F8VPY8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Snora73a-201ENSMUST00000082453 205 ntBASIC13.37□□□□□ -0.27
Colca2F8VPY8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.36□□□□□ -0.27
Colca2F8VPY8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gm16570-201ENSMUST00000161951 436 ntBASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gm44364-201ENSMUST00000198368 141 ntBASIC13.36□□□□□ -0.27
Colca2F8VPY8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.36□□□□□ -0.27
Colca2F8VPY8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Itm2b-204ENSMUST00000228637 783 ntBASIC13.36□□□□□ -0.27
Colca2F8VPY8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Colca2F8VPY8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.35□□□□□ -0.27
Colca2F8VPY8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Gm37466-201ENSMUST00000195692 652 ntBASIC13.35□□□□□ -0.27
Colca2F8VPY8 Gm43758-201ENSMUST00000199500 367 ntBASIC13.35□□□□□ -0.27
Colca2F8VPY8 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.35□□□□□ -0.27
Colca2F8VPY8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Colca2F8VPY8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.34□□□□□ -0.27
Colca2F8VPY8 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.34□□□□□ -0.27
Colca2F8VPY8 Gm26461-201ENSMUST00000175064 290 ntBASIC13.34□□□□□ -0.27
Colca2F8VPY8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.34□□□□□ -0.27
Colca2F8VPY8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms