Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh1F7BJK1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh1F7BJK1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm13036-201ENSMUST00000117799 748 ntBASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm16198-201ENSMUST00000118766 670 ntBASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm13597-201ENSMUST00000121239 375 ntBASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm27741-201ENSMUST00000185060 237 ntBASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh1F7BJK1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm10275-202ENSMUST00000168697 495 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm45098-201ENSMUST00000207179 657 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gm10275-201ENSMUST00000092620 635 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh1F7BJK1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh1F7BJK1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms