Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10477F6SW83 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Gm13464-201ENSMUST00000119418 935 ntBASIC13.19□□□□□ -0.3
Gm10477F6SW83 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.19□□□□□ -0.3
Gm10477F6SW83 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.19□□□□□ -0.3
Gm10477F6SW83 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10477F6SW83 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.18□□□□□ -0.3
Gm10477F6SW83 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.18□□□□□ -0.3
Gm10477F6SW83 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10477F6SW83 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Gm25745-201ENSMUST00000174945 133 ntBASIC13.17□□□□□ -0.3
Gm10477F6SW83 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Gm7889-201ENSMUST00000185591 958 ntBASIC13.17□□□□□ -0.3
Gm10477F6SW83 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Gm10477F6SW83 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms