Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm37489-201ENSMUST00000191883 159 ntBASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.4■□□□□ 0.38
Ccdc85cE9Q6B2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc85cE9Q6B2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc85cE9Q6B2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc85cE9Q6B2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Gm13297-201ENSMUST00000120205 934 ntBASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc85cE9Q6B2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85cE9Q6B2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Gm5523-201ENSMUST00000180415 997 ntBASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85cE9Q6B2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Ccdc85cE9Q6B2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85cE9Q6B2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85cE9Q6B2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms