Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Gm44405-201ENSMUST00000198952 126 ntBASIC7.76□□□□□ -1.17
Herc1E9PZP8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Herc1E9PZP8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Herc1E9PZP8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm12539-201ENSMUST00000121549 1098 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm4868-201ENSMUST00000164138 789 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm5896-201ENSMUST00000189662 1024 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm45500-201ENSMUST00000211676 803 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm28388-201ENSMUST00000186262 437 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm44064-201ENSMUST00000204964 1087 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm11450-201ENSMUST00000121144 333 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm4775-201ENSMUST00000169588 402 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Gm44775-201ENSMUST00000207266 1456 ntBASIC7.75□□□□□ -1.17
Herc1E9PZP8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Herc1E9PZP8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC7.74□□□□□ -1.17
Herc1E9PZP8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Herc1E9PZP8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms