Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm2991-201ENSMUST00000173338 480 ntBASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm27341-201ENSMUST00000183570 106 ntBASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm6621-201ENSMUST00000193251 772 ntBASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf11E9PZM7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gm5687-201ENSMUST00000118252 640 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gm25927-201ENSMUST00000175058 117 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gm38158-201ENSMUST00000194617 339 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gm6082-201ENSMUST00000215204 454 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Scaf11E9PZM7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm22902-201ENSMUST00000158488 302 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm7029-201ENSMUST00000173226 450 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm9445-201ENSMUST00000207454 1285 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm8227-201ENSMUST00000223306 571 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm44985-201ENSMUST00000206202 1016 ntBASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scaf11E9PZM7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Efs-202ENSMUST00000227037 2540 ntBASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf11E9PZM7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms