Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a3E9PWQ3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm12948-201ENSMUST00000119406 682 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a3E9PWQ3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm27772-201ENSMUST00000184900 187 ntBASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm44967-201ENSMUST00000207047 631 ntBASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a3E9PWQ3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms