Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm9755-201ENSMUST00000032981 1356 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm7895-201ENSMUST00000187459 1173 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm37922-201ENSMUST00000195596 455 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Gm45865-201ENSMUST00000211815 945 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Gm13786-201ENSMUST00000122371 333 ntBASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Gm9368-201ENSMUST00000219348 831 ntBASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hfm1D3Z4R1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Gm6334-201ENSMUST00000207083 228 ntBASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hfm1D3Z4R1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Hfm1D3Z4R1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hfm1D3Z4R1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.64■□□□□ 0.73
Hfm1D3Z4R1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hfm1D3Z4R1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms