Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Gm3880A0A1B0GSB3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm26616-202ENSMUST00000195676 3107 ntBASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm8242-201ENSMUST00000193029 1420 ntBASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Gm3880A0A1B0GSB3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Gm3880A0A1B0GSB3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms