Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm9103-201ENSMUST00000119371 405 ntBASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Gm8749-201ENSMUST00000117737 331 ntBASIC9.81□□□□□ -0.84
Trav13d-4A0A0G2JFX3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms