Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Trav5-4A0A075B652 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Olfr286-202ENSMUST00000205305 969 ntBASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav5-4A0A075B652 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gm9385-201ENSMUST00000117563 472 ntBASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Gm1401-201ENSMUST00000122048 772 ntBASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5-4A0A075B652 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5-4A0A075B652 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5-4A0A075B652 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav5-4A0A075B652 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms