Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm5493S4R2D1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5493S4R2D1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5493S4R2D1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5493S4R2D1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5493S4R2D1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5493S4R2D1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5493S4R2D1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5493S4R2D1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5493S4R2D1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm5493S4R2D1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.52■□□□□ 0.56
Gm5493S4R2D1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5493S4R2D1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm5493S4R2D1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm5493S4R2D1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm5493S4R2D1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5493S4R2D1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5493S4R2D1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5493S4R2D1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5493S4R2D1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5493S4R2D1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Gm5493S4R2D1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5493S4R2D1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Gm5493S4R2D1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5493S4R2D1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5493S4R2D1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5493S4R2D1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm5493S4R2D1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm5493S4R2D1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm5493S4R2D1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm5493S4R2D1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm5493S4R2D1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5493S4R2D1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5493S4R2D1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Gm5493S4R2D1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.46■□□□□ 0.55
Gm5493S4R2D1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Gm5493S4R2D1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Gm5493S4R2D1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5493S4R2D1 Gm24970-201ENSMUST00000175582 82 ntBASIC18.45■□□□□ 0.54
Gm5493S4R2D1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5493S4R2D1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5493S4R2D1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5493S4R2D1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Gm5493S4R2D1 Zfp131-205ENSMUST00000223812 663 ntBASIC18.42■□□□□ 0.54
Gm5493S4R2D1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5493S4R2D1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5493S4R2D1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Gm5493S4R2D1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm5493S4R2D1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5493S4R2D1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gm5493S4R2D1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5493S4R2D1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms