Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cx3cr1Q9Z0D9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cx3cr1Q9Z0D9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cx3cr1Q9Z0D9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cr1Q9Z0D9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cr1Q9Z0D9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cr1Q9Z0D9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cr1Q9Z0D9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cx3cr1Q9Z0D9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cx3cr1Q9Z0D9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cx3cr1Q9Z0D9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cx3cr1Q9Z0D9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cx3cr1Q9Z0D9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cx3cr1Q9Z0D9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cx3cr1Q9Z0D9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cx3cr1Q9Z0D9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cx3cr1Q9Z0D9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.47■□□□□ 0.55
Cx3cr1Q9Z0D9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cr1Q9Z0D9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cr1Q9Z0D9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cr1Q9Z0D9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cx3cr1Q9Z0D9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cr1Q9Z0D9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cr1Q9Z0D9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.43■□□□□ 0.54
Cx3cr1Q9Z0D9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Gm22567-201ENSMUST00000175542 342 ntBASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cr1Q9Z0D9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cr1Q9Z0D9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cr1Q9Z0D9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cr1Q9Z0D9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cr1Q9Z0D9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.4■□□□□ 0.54
Cx3cr1Q9Z0D9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms