Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RpgrQ9R0X5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.02■■□□□ 1.12
RpgrQ9R0X5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
RpgrQ9R0X5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RpgrQ9R0X5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22■■□□□ 1.11
RpgrQ9R0X5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RpgrQ9R0X5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22■■□□□ 1.11
RpgrQ9R0X5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RpgrQ9R0X5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RpgrQ9R0X5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RpgrQ9R0X5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RpgrQ9R0X5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RpgrQ9R0X5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RpgrQ9R0X5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Gm16437-201ENSMUST00000025669 507 ntBASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RpgrQ9R0X5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RpgrQ9R0X5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RpgrQ9R0X5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RpgrQ9R0X5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RpgrQ9R0X5 Mir6538-201ENSMUST00000183713 110 ntBASIC21.96■■□□□ 1.11
RpgrQ9R0X5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
RpgrQ9R0X5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RpgrQ9R0X5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RpgrQ9R0X5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RpgrQ9R0X5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RpgrQ9R0X5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RpgrQ9R0X5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RpgrQ9R0X5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RpgrQ9R0X5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RpgrQ9R0X5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RpgrQ9R0X5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RpgrQ9R0X5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RpgrQ9R0X5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.93■■□□□ 1.1
RpgrQ9R0X5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RpgrQ9R0X5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RpgrQ9R0X5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RpgrQ9R0X5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RpgrQ9R0X5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RpgrQ9R0X5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RpgrQ9R0X5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RpgrQ9R0X5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RpgrQ9R0X5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RpgrQ9R0X5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RpgrQ9R0X5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RpgrQ9R0X5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms