Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nubp2Q9R061 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nubp2Q9R061 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nubp2Q9R061 Gm7332-201ENSMUST00000118351 454 ntBASIC19.29■□□□□ 0.68
Nubp2Q9R061 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.29■□□□□ 0.68
Nubp2Q9R061 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nubp2Q9R061 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nubp2Q9R061 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nubp2Q9R061 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
Nubp2Q9R061 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nubp2Q9R061 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nubp2Q9R061 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nubp2Q9R061 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Gm14523-201ENSMUST00000117260 558 ntBASIC19.27■□□□□ 0.68
Nubp2Q9R061 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Nubp2Q9R061 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nubp2Q9R061 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nubp2Q9R061 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nubp2Q9R061 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nubp2Q9R061 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.25■□□□□ 0.67
Nubp2Q9R061 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nubp2Q9R061 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nubp2Q9R061 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nubp2Q9R061 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.22■□□□□ 0.67
Nubp2Q9R061 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nubp2Q9R061 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Nubp2Q9R061 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nubp2Q9R061 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nubp2Q9R061 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.2■□□□□ 0.66
Nubp2Q9R061 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nubp2Q9R061 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.2■□□□□ 0.66
Nubp2Q9R061 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nubp2Q9R061 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nubp2Q9R061 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.19■□□□□ 0.66
Nubp2Q9R061 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.19■□□□□ 0.66
Nubp2Q9R061 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nubp2Q9R061 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Gm44428-201ENSMUST00000204474 874 ntBASIC19.18■□□□□ 0.66
Nubp2Q9R061 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nubp2Q9R061 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nubp2Q9R061 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nubp2Q9R061 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms