Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SrfQ9JM73 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SrfQ9JM73 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.06■□□□□ 0.96
SrfQ9JM73 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SrfQ9JM73 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SrfQ9JM73 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SrfQ9JM73 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
SrfQ9JM73 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SrfQ9JM73 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SrfQ9JM73 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.05■□□□□ 0.96
SrfQ9JM73 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SrfQ9JM73 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SrfQ9JM73 Gm13241-201ENSMUST00000094493 780 ntBASIC21.04■□□□□ 0.96
SrfQ9JM73 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SrfQ9JM73 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SrfQ9JM73 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SrfQ9JM73 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SrfQ9JM73 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SrfQ9JM73 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SrfQ9JM73 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.01■□□□□ 0.95
SrfQ9JM73 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SrfQ9JM73 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SrfQ9JM73 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SrfQ9JM73 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SrfQ9JM73 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21■□□□□ 0.95
SrfQ9JM73 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21■□□□□ 0.95
SrfQ9JM73 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21■□□□□ 0.95
SrfQ9JM73 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SrfQ9JM73 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.99■□□□□ 0.95
SrfQ9JM73 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.99■□□□□ 0.95
SrfQ9JM73 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SrfQ9JM73 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.99■□□□□ 0.95
SrfQ9JM73 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SrfQ9JM73 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.98■□□□□ 0.95
SrfQ9JM73 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SrfQ9JM73 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SrfQ9JM73 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SrfQ9JM73 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SrfQ9JM73 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SrfQ9JM73 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
SrfQ9JM73 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SrfQ9JM73 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SrfQ9JM73 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SrfQ9JM73 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SrfQ9JM73 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SrfQ9JM73 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SrfQ9JM73 Gm40881-201ENSMUST00000223397 166 ntBASIC20.96■□□□□ 0.95
SrfQ9JM73 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SrfQ9JM73 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.95■□□□□ 0.94
SrfQ9JM73 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SrfQ9JM73 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.95■□□□□ 0.94
SrfQ9JM73 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SrfQ9JM73 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.94■□□□□ 0.94
SrfQ9JM73 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 Gm9847-201ENSMUST00000052528 599 ntBASIC20.94■□□□□ 0.94
SrfQ9JM73 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.94■□□□□ 0.94
SrfQ9JM73 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SrfQ9JM73 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SrfQ9JM73 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SrfQ9JM73 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SrfQ9JM73 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SrfQ9JM73 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SrfQ9JM73 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SrfQ9JM73 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SrfQ9JM73 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SrfQ9JM73 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SrfQ9JM73 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SrfQ9JM73 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SrfQ9JM73 Gm22238-201ENSMUST00000175222 88 ntBASIC20.91■□□□□ 0.94
SrfQ9JM73 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.91■□□□□ 0.94
SrfQ9JM73 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.91■□□□□ 0.94
SrfQ9JM73 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SrfQ9JM73 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SrfQ9JM73 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SrfQ9JM73 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SrfQ9JM73 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SrfQ9JM73 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SrfQ9JM73 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SrfQ9JM73 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.9■□□□□ 0.94
SrfQ9JM73 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.89■□□□□ 0.93
SrfQ9JM73 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SrfQ9JM73 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.89■□□□□ 0.93
SrfQ9JM73 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.89■□□□□ 0.93
SrfQ9JM73 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SrfQ9JM73 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.88■□□□□ 0.93
SrfQ9JM73 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SrfQ9JM73 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.88■□□□□ 0.93
SrfQ9JM73 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.88■□□□□ 0.93
SrfQ9JM73 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SrfQ9JM73 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms